I use clj-kondo on a windows corporate laptop, and started getting issues from the anti-virus software when upgrading to the latest version in scoop. In any case, I'm used to that happening semi-frequently with lesser used cli apps on such an environment.
Just wanted to say that I appreciate that you provide a jar as well. I put the below in a clj-kondo.bat file and put that in the path, and it seems to be invoked correctly from cmd, powershell, and emacs (flycheck with the default settings).
@echo off
java -jar C:\path\to\clj-kondo-2026.01.12-standalone.jar %*